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Cy5.5

(2Z)-2-[(2E,4E)-5-[3-(5-carboxypentyl)-1,1-dimethyl-6,8-disulfobenzo[e]indol-3-ium-2-yl]penta-2,4-dienylidene]-3-ethyl-1,1-dimethyl-8-sulfobenzo[e]indole-6-sulfonate

FormulaC41H44N2O14S4
Mol. weight917.043
PubChem CID131704516
InChIKeyLIZDKDDCWIEQIN-UHFFFAOYSA-N
SMILESCCN\1C2=C(C3=C(C=C2)C(=CC(=C3)S(=O)(=O)O)S(=O)(=O)[O-])C(/C1=C/C=C/C=C/C4=[N+](C5=C(C4(C)C)C6=C(C=C5)C(=CC(=C6)S(=O)(=O)O)S(=O)(=O)O)CCCCCC(=O)O)(C)C
12,593Patents
375Research papers376 indexed in detail
7,529Patents - last 3 years
24Papers - last 3 years

Who owns the IP

The organizations most actively patenting around this compound, ranked by referenced patent volume.

#AssigneePatents
1Roche Holding AG293
2Becton Dickinson and Co242
3University of California188
410X Genomics Inc174
5Regeneron Pharmaceuticals Inc158
6Leland Stanford Junior University150
7Harvard University146
8Massachusetts Institute of Technology140
9Amgen Inc134
10Institut National de la Santé et de la Recherche Médicale120

Explore the full landscape

This preview shows the leading assignees. Cypris reveals the full ownership landscape - every filing entity, filing trends, and portfolio momentum.

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Where innovation is concentrated

Patent classifications ranked by volume reveal the technical domains with the most active filing.

#CodeAreaPatents
1A61KMedicinal preparations7,074
2A61PTherapeutic activity (drug indications)6,093
3C07KPeptides5,065
4C12NMicroorganisms, enzymes4,019
5G01NInvestigating / analysing materials3,558
6C12QMeasuring/testing involving enzymes3,030
7Y02AClimate change adaptation1,067
8C07DHeterocyclic compounds614
9C12YEnzyme nomenclature (EC numbers)448
10B01L303

AI mapped opportunity space

This preview shows where patent activity concentrates. Cypris maps the full classification landscape to surface technical whitespace and IP headroom.

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Representative patents

The filings that best characterise the patent activity around this compound, most-referenced first.

TitleYearAssignee
CY5.5 carboxylic acid marked heat shock protein 90-II type fluorescent probe, preparation method and application thereof2025
Heat shock protein 90-I type fluorescent probe coupled with CY5.5 carboxylic acid, preparation method and application thereof2025

How research activity has moved

Papers published per year for this compound, over the last decade of indexed records.

YearPapers
201624
201715
201822
201921
202012
20219
202212
202310
202412
20252

Who's driving the science

The most-published authors working with this compound, alongside their primary affiliations.

#AuthorAffiliationPapers
1Michael SchäfersUniversity of Münster10
2Ralph WeisslederMassachusetts General Hospital10
3Christoph BremerUniversity Hospital Münster9
4Carsten HöltkeUniversity Hospital Münster7
5Alexei BogdanovMassachusetts General Hospital7
6Kwangmeyung KimKorea Institute of Science and Technology7
7Walter HeindelUniversity Hospital Münster6
8Zdravka MedarovaMassachusetts General Hospital6
9Eyk SchellenbergerHarvard University6
10Sanjiv S. GambhirStanford University6

Research leaders

This preview lists the top authors. Cypris surfaces the full researcher landscape, their affiliations, and how scientific influence is shifting.

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The literature that defines it

The most-cited papers anchoring the scientific record for this compound.

Frequently asked questions

Common questions about this compound's patent and research landscape, answered from the underlying data.

What is the molecular formula and weight of Cy5.5?

Cy5.5 has the molecular formula C41H44N2O14S4 and a molecular weight of 917.043 g/mol.

Which organizations hold the most patents related to Cy5.5?

The leading patent assignees for Cy5.5-related technology are Roche Holding AG with 293 patents, Becton Dickinson and Co with 242 patents, and University of California with 188 patents.

What are the most active research areas in Cy5.5 patents based on CPC classification?

The most prevalent CPC subclasses for Cy5.5 patents are A61K (pharmaceutical preparations, 7074 patents), A61P (specific therapeutic activity of chemical compounds, 6093 patents), and C07K (peptides, 5065 patents), indicating focus on pharmaceutical and bioconjugate applications.

What notable applications of Cy5.5 are documented in the literature?

Published applications include tumor visualization through a Chlorotoxin:Cy5.5 bioconjugate for intraoperative cancer imaging, multimodal nanoparticles for brain tumor delineation combining magnetic resonance imaging and optical imaging, fluorescence molecular tomography for antitumor treatment visualization using annexin V–Cy5.5 conjugates, and near-infrared fluorescence imaging of integrin αvβ3 in brain tumor xenografts.

Who are the most prolific researchers publishing on Cy5.5?

Leading researchers in Cy5.5 applications include Michael Schäfers from University of Münster with 10 papers, Ralph Weissleder from Massachusetts General Hospital with 10 papers, and Christoph Bremer from University Hospital Münster with 9 papers.

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